STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO86674.1PTS system, mannitol-specific IIC component. (636 aa)    
Predicted Functional Partners:
mtlD
D-mannitol 1-phosphate 5-dehydrogenase.
 
 0.999
SEO57641.1
PTS system, fructose-specific IIC component.
  
 
 0.999
SEO58500.1
Uncharacterized protein; PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4).
  
 
0.999
SEO86645.1
Mannitol-1-phosphate 5-dehydrogenase.
 
 
 0.999
SEN53616.1
Tagaturonate reductase.
  
 
 0.998
SEN90839.1
Mannitol operon transcriptional antiterminator.
 
 
 0.995
SEO57593.1
Activator of the mannose operon, transcriptional antiterminator.
 
 
 0.990
SEO01933.1
PRD domain-containing protein.
 
 
 0.987
SEO87543.1
Lichenan operon transcriptional antiterminator.
 
 
 0.987
SEO14848.1
Lichenan operon transcriptional antiterminator.
 
 
 0.986
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.