STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO95953.1Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (974 aa)    
Predicted Functional Partners:
SEO18423.1
Non-processive endocellulase.
     
 0.736
SEO95239.1
Non-processive endocellulase.
     
 0.736
SEO89603.1
Hypothetical protein.
 
  
 0.695
SEN45557.1
Beta-glucosidase.
 
  
 
0.588
SEO52546.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 
0.586
SEN88772.1
Reducing-end-xylose releasing exo-oligoxylanase.
  
  
 0.568
SEO81213.1
Uncharacterized membrane protein.
  
     0.565
SEN90943.1
CubicO group peptidase, beta-lactamase class C family.
 
 
 0.541
SEO52939.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.518
SEO95977.1
Acetyltransferase (GNAT) family protein.
       0.515
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.