STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ26661.1DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF00717; match to protein family HMM PF01381. (232 aa)    
Predicted Functional Partners:
EGJ27882.1
Identified by match to protein family HMM PF00817.
 
     0.654
EGJ27346.1
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
  
     0.601
EGJ27943.1
Hypothetical protein.
       0.544
EGJ27043.1
Identified by match to protein family HMM PF08863.
       0.544
EGJ27200.1
Hypothetical protein.
  
     0.465
EGJ26409.1
Conserved domain protein.
       0.458
lepB_1
Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.
  
 
  0.407
lepB_2
Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.
  
 
  0.407
lepB_3
Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227.
  
 
  0.407
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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