STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacEPTS system protein, lactose-specific IIC component; Identified by match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00394; match to protein family HMM TIGR00410; match to protein family HMM TIGR00853. (571 aa)    
Predicted Functional Partners:
lacF
Lactose-specific phosphotransferase enzyme IIA component; Identified by match to protein family HMM PF02255; match to protein family HMM TIGR00823.
 
 0.999
celC
Cellobiose PTS family porter IIA component; Identified by match to protein family HMM PF02255.
 
 0.999
chbA
Putative N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component; Identified by match to protein family HMM PF02255.
 
 0.999
lacG
6-phospho-beta-galactosidase; Identified by match to protein family HMM PF00232; match to protein family HMM TIGR01233; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.996
EGJ27211.1
6-phospho-beta-glucosidase; Identified by match to protein family HMM PF00232.
  
 
 0.949
celA
6-phospho-beta-glucosidase; Identified by match to protein family HMM PF00232; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.949
lacC_1
Tagatose-6-phosphate kinase; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR01231; match to protein family HMM TIGR03168.
 
  
 0.933
licR_6
PRD domain protein; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF05043; match to protein family HMM PF08279.
  
 
 0.918
lacB_1
Galactose-6-phosphate isomerase, LacB subunit; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01119.
 
  
 0.884
lacD_1
Tagatose-bisphosphate aldolase; Identified by match to protein family HMM PF01791; match to protein family HMM TIGR01232; Belongs to the aldolase LacD family.
 
  
 0.859
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.