Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ26775.1 | EGJ27600.1 | STRPO_0046 | STRPO_0045 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | VRR-NUC domain protein; Identified by match to protein family HMM PF08774. | 0.949 |
| EGJ26775.1 | EGJ28005.1 | STRPO_0046 | STRPO_0044 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | Phage/plasmid primase, P4 family, C-terminal domain protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | 0.858 |
| EGJ26775.1 | dnaN | STRPO_0046 | STRPO_1391 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.952 |
| EGJ26775.1 | polA_2 | STRPO_0046 | STRPO_1262 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.977 |
| EGJ26775.1 | recA | STRPO_0046 | STRPO_1325 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.869 |
| EGJ26775.1 | rpoA | STRPO_0046 | STRPO_1475 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.978 |
| EGJ26775.1 | rpoB | STRPO_0046 | STRPO_1514 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
| EGJ26775.1 | rpoC | STRPO_0046 | STRPO_1515 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.927 |
| EGJ26775.1 | rpoZ | STRPO_0046 | STRPO_0961 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.978 |
| EGJ26775.1 | udk | STRPO_0046 | STRPO_1993 | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | Uridine kinase; Identified by match to protein family HMM PF00485; match to protein family HMM TIGR00235. | 0.856 |
| EGJ27600.1 | EGJ26775.1 | STRPO_0045 | STRPO_0046 | VRR-NUC domain protein; Identified by match to protein family HMM PF08774. | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | 0.949 |
| EGJ27600.1 | EGJ28005.1 | STRPO_0045 | STRPO_0044 | VRR-NUC domain protein; Identified by match to protein family HMM PF08774. | Phage/plasmid primase, P4 family, C-terminal domain protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | 0.870 |
| EGJ28005.1 | EGJ26775.1 | STRPO_0044 | STRPO_0046 | Phage/plasmid primase, P4 family, C-terminal domain protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | 0.858 |
| EGJ28005.1 | EGJ27600.1 | STRPO_0044 | STRPO_0045 | Phage/plasmid primase, P4 family, C-terminal domain protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | VRR-NUC domain protein; Identified by match to protein family HMM PF08774. | 0.870 |
| dnaN | EGJ26775.1 | STRPO_1391 | STRPO_0046 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176. | 0.952 |
| dnaN | polA_2 | STRPO_1391 | STRPO_1262 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.999 |
| dnaN | recA | STRPO_1391 | STRPO_1325 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.942 |
| dnaN | rpoA | STRPO_1391 | STRPO_1475 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.491 |
| dnaN | rpoB | STRPO_1391 | STRPO_1514 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.606 |
| dnaN | rpoC | STRPO_1391 | STRPO_1515 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.538 |
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