Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ26857.1 | EGJ27041.1 | STRPO_0054 | STRPO_0059 | Modification methylase Rho11sI family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558. | 0.682 |
| EGJ26857.1 | EGJ27484.1 | STRPO_0054 | STRPO_0055 | Modification methylase Rho11sI family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Hypothetical protein. | 0.581 |
| EGJ26857.1 | EGJ28058.1 | STRPO_0054 | STRPO_0056 | Modification methylase Rho11sI family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Hypothetical protein; Identified by glimmer; putative. | 0.439 |
| EGJ26857.1 | EGJ28155.1 | STRPO_0054 | STRPO_0058 | Modification methylase Rho11sI family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Hypothetical protein. | 0.488 |
| EGJ26857.1 | EGJ28244.1 | STRPO_0054 | STRPO_0053 | Modification methylase Rho11sI family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Prophage LambdaSa04, methyltransferase, C-5 cytosine-specific family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.946 |
| EGJ26857.1 | EGJ28328.1 | STRPO_0054 | STRPO_0060 | Modification methylase Rho11sI family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Putative phage terminase, large subunit; Identified by match to protein family HMM PF03354. | 0.512 |
| EGJ27041.1 | EGJ26857.1 | STRPO_0059 | STRPO_0054 | Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558. | Modification methylase Rho11sI family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.682 |
| EGJ27041.1 | EGJ27722.1 | STRPO_0059 | STRPO_0057 | Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558. | Hypothetical protein. | 0.693 |
| EGJ27041.1 | EGJ28058.1 | STRPO_0059 | STRPO_0056 | Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558. | Hypothetical protein; Identified by glimmer; putative. | 0.503 |
| EGJ27041.1 | EGJ28155.1 | STRPO_0059 | STRPO_0058 | Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558. | Hypothetical protein. | 0.763 |
| EGJ27041.1 | EGJ28244.1 | STRPO_0059 | STRPO_0053 | Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558. | Prophage LambdaSa04, methyltransferase, C-5 cytosine-specific family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.728 |
| EGJ27041.1 | EGJ28328.1 | STRPO_0059 | STRPO_0060 | Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558. | Putative phage terminase, large subunit; Identified by match to protein family HMM PF03354. | 0.951 |
| EGJ27484.1 | EGJ26857.1 | STRPO_0055 | STRPO_0054 | Hypothetical protein. | Modification methylase Rho11sI family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.581 |
| EGJ27484.1 | EGJ27722.1 | STRPO_0055 | STRPO_0057 | Hypothetical protein. | Hypothetical protein. | 0.415 |
| EGJ27484.1 | EGJ28058.1 | STRPO_0055 | STRPO_0056 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.570 |
| EGJ27484.1 | EGJ28155.1 | STRPO_0055 | STRPO_0058 | Hypothetical protein. | Hypothetical protein. | 0.415 |
| EGJ27484.1 | EGJ28244.1 | STRPO_0055 | STRPO_0053 | Hypothetical protein. | Prophage LambdaSa04, methyltransferase, C-5 cytosine-specific family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.581 |
| EGJ27722.1 | EGJ27041.1 | STRPO_0057 | STRPO_0059 | Hypothetical protein. | Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558. | 0.693 |
| EGJ27722.1 | EGJ27484.1 | STRPO_0057 | STRPO_0055 | Hypothetical protein. | Hypothetical protein. | 0.415 |
| EGJ27722.1 | EGJ28058.1 | STRPO_0057 | STRPO_0056 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.547 |
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