STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ26399.1Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537. (429 aa)    
Predicted Functional Partners:
EGJ26582.1
Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.
 
 
 0.990
EGJ28288.1
Putative phage DNA packaging protein.
 
   0.989
clpP_1
ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Identified by match to protein family HMM PF00574.
 
  
 0.961
EGJ28228.1
Putative phage head-tail adaptor.
  
   0.946
EGJ28328.1
Putative phage terminase, large subunit; Identified by match to protein family HMM PF03354.
 
   
 0.891
EGJ27041.1
Phage terminase, small subunit, P27 family; Identified by match to protein family HMM TIGR01558.
 
  
 0.879
EGJ28155.1
Hypothetical protein.
 
    0.867
EGJ27012.1
Hypothetical protein.
 
     0.861
EGJ27658.1
Phage major tail protein, phi13 family; Identified by match to protein family HMM TIGR01603.
 
     0.857
EGJ26509.1
Toxin secretion/phage lysis holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593.
 
   
 0.854
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.