STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27228.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
EGJ27974.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
 
     0.713
EGJ26804.1
Identified by match to protein family HMM PF02674.
  
     0.653
EGJ26559.1
Hypothetical protein.
  
     0.528
EGJ27623.1
Identified by match to protein family HMM PF06207.
  
     0.523
paaI
Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369.
       0.490
EGJ28245.1
Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
       0.484
EGJ27452.1
Hypothetical protein; Identified by glimmer; putative.
       0.464
naiP
Transporter, major facilitator family protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
     0.430
pbp1B
Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912.
  
     0.430
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.