STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pnuCNicotinamide mononucleotide transporter PnuC; Identified by match to protein family HMM PF04973; match to protein family HMM TIGR01528. (233 aa)    
Predicted Functional Partners:
yheS_4
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.678
EGJ28166.1
YcaO-like family; Identified by match to protein family HMM PF02624; match to protein family HMM TIGR03604.
  
     0.654
EGJ27502.1
Hypothetical protein.
  
    0.641
EGJ27972.1
LPXTG-motif cell wall anchor domain protein.
  
     0.592
EGJ27986.1
Bifunctional DNA primase/polymerase, N-terminal domain protein; Identified by match to protein family HMM PF08708; match to protein family HMM PF09250.
  
     0.576
EGJ27313.1
Hypothetical protein.
  
     0.543
EGJ27978.1
Hypothetical protein.
  
     0.514
sagH
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
  
     0.513
aphA
HAD phosphatase, family IIIB; Identified by match to protein family HMM PF03767; match to protein family HMM TIGR01672.
  
     0.506
rgg
Transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein; Identified by match to protein family HMM TIGR01716.
  
    0.505
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.