STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malXABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. (416 aa)    
Predicted Functional Partners:
malG
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.999
malF
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.997
msmK
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
 
 0.993
EGJ28172.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.969
ugpA_1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.957
glnA
Glutamine synthetase, type I; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; Belongs to the glutamine synthetase family.
    
 
 0.861
malQ
4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217.
  
  
 0.729
pulA
Pullulanase, type I; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.683
ycjP_2
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.638
malR
Transcriptional regulator, LacI family; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
  
  
 0.633
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.