Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ27877.1 | EGJ28177.1 | STRPO_0132 | STRPO_0134 | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. | 0.749 |
| EGJ27877.1 | apt | STRPO_0132 | STRPO_0128 | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.511 |
| EGJ27877.1 | dnaD_3 | STRPO_0132 | STRPO_0129 | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | DnaD domain protein; Identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446. | 0.616 |
| EGJ27877.1 | nth | STRPO_0132 | STRPO_0130 | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.616 |
| EGJ27877.1 | trmK | STRPO_0132 | STRPO_0131 | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | Identified by match to protein family HMM PF04816. | 0.966 |
| EGJ27877.1 | zupT | STRPO_0132 | STRPO_0133 | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | Metal cation transporter, ZIP family; Identified by match to protein family HMM PF02535. | 0.763 |
| EGJ28177.1 | EGJ27877.1 | STRPO_0134 | STRPO_0132 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | 0.749 |
| EGJ28177.1 | apt | STRPO_0134 | STRPO_0128 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.491 |
| EGJ28177.1 | dnaD_3 | STRPO_0134 | STRPO_0129 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. | DnaD domain protein; Identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446. | 0.583 |
| EGJ28177.1 | nth | STRPO_0134 | STRPO_0130 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.583 |
| EGJ28177.1 | trmK | STRPO_0134 | STRPO_0131 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. | Identified by match to protein family HMM PF04816. | 0.749 |
| EGJ28177.1 | zupT | STRPO_0134 | STRPO_0133 | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. | Metal cation transporter, ZIP family; Identified by match to protein family HMM PF02535. | 0.785 |
| apt | EGJ27877.1 | STRPO_0128 | STRPO_0132 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Dinuclear metal center protein, YbgI family; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. | 0.511 |
| apt | EGJ28177.1 | STRPO_0128 | STRPO_0134 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. | 0.491 |
| apt | dnaD_3 | STRPO_0128 | STRPO_0129 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | DnaD domain protein; Identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446. | 0.626 |
| apt | nth | STRPO_0128 | STRPO_0130 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.635 |
| apt | trmK | STRPO_0128 | STRPO_0131 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Identified by match to protein family HMM PF04816. | 0.499 |
| apt | zupT | STRPO_0128 | STRPO_0133 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Metal cation transporter, ZIP family; Identified by match to protein family HMM PF02535. | 0.482 |
| dinG | dnaD_3 | STRPO_0656 | STRPO_0129 | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | DnaD domain protein; Identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446. | 0.616 |
| dinG | dnaI | STRPO_0656 | STRPO_0910 | Exonuclease DnaQ family/helicase DinG family; 3'-5' exonuclease. | Primosomal protein DnaI; Identified by match to protein family HMM PF07319. | 0.530 |
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