STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysBTranscriptional regulator, LysR family; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
cpsB
Protein-tyrosine-phosphatase; Identified by match to protein family HMM PF02811.
    
  0.610
wzg
Cell envelope-like function transcriptional attenuator common domain protein; Identified by match to protein family HMM PF02916; match to protein family HMM PF03816; match to protein family HMM TIGR00350.
  
  
 0.511
cpsD
Tyrosine-protein kinase CpsD; Identified by match to protein family HMM TIGR01007.
     
 0.508
cap8A
Polysaccharide export protein, MPA1 family; Identified by match to protein family HMM PF02706.
       0.503
wcaJ
Bacterial sugar transferase; Identified by match to protein family HMM PF02397.
       0.496
capD-2
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
       0.488
EGJ26965.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
       0.459
cotSA
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
       0.416
EGJ27137.1
Identified by match to protein family HMM PF00132.
       0.416
EGJ26513.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
       0.409
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.