STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27383.1Conserved domain protein. (425 aa)    
Predicted Functional Partners:
EGJ26702.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01370; match to protein family HMM PF07993.
 
 
 0.900
EGJ27578.1
UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236.
 
 
 0.856
EGJ26513.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
     0.806
pulA
Pullulanase, type I; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; Belongs to the glycosyl hydrolase 13 family.
   
 0.798
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.797
EGJ26655.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01554; match to protein family HMM PF01943.
  
 
 0.787
asp3
Accessory Sec system protein Asp3; Identified by match to protein family HMM TIGR03711.
    
 
 0.776
capD
Capsular polysaccharide biosynthesis protein CapD; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM PF08485.
 
  
 0.764
asp2
Accessory Sec system protein Asp2; Identified by match to protein family HMM TIGR03712.
    
 
 0.764
wcaJ
Bacterial sugar transferase; Identified by match to protein family HMM PF02397.
  
  
 0.756
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.