STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yecS_3ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (220 aa)    
Predicted Functional Partners:
yckB
ABC transporter, substrate-binding protein, family 3; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
 0.994
artM_1
Arginine ABC transporter, ATP-binding protein ArtM; Identified by match to protein family HMM PF00005.
 0.940
artM_3
Arginine ABC transporter, ATP-binding protein ArtM; Identified by match to protein family HMM PF00005.
 0.939
glnQ_2
Glutamine ABC transporter, ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005.
 0.938
tcyA_2
ABC transporter, substrate-binding protein, family 3; Identified by match to protein family HMM PF00497.
  0.938
artM_2
Arginine ABC transporter, ATP-binding protein ArtM; Identified by match to protein family HMM PF00005.
 0.938
fliY
ABC transporter, substrate-binding protein, family 3; Identified by match to protein family HMM PF00497.
 0.908
glnQ_1
Glutamine ABC transporter, ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005.
 0.884
peb1A
Major cell-binding factor; Identified by match to protein family HMM PF00497.
 
 0.859
tcyA_1
ABC transporter, substrate-binding protein, family 3; Identified by match to protein family HMM PF00497.
 0.855
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.