STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27052.1Hypothetical protein; Identified by glimmer; putative. (57 aa)    
Predicted Functional Partners:
EGJ26776.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
       0.693
EGJ27644.1
Hypothetical protein.
       0.553
EGJ27285.1
Hypothetical protein.
       0.553
EGJ26528.1
Hypothetical protein.
       0.553
EGJ26472.1
Hypothetical protein.
       0.553
EGJ27398.1
Phage nucleotide-binding protein; Identified by match to protein family HMM TIGR01618.
       0.553
EGJ26612.1
Putative toxin-antitoxin system, toxin component.
       0.457
EGJ27726.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
       0.457
EGJ28018.1
Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271.
       0.418
EGJ27854.1
Identified by match to protein family HMM PF05037.
       0.418
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.