STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27398.1Phage nucleotide-binding protein; Identified by match to protein family HMM TIGR01618. (235 aa)    
Predicted Functional Partners:
EGJ28018.1
Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271.
 
     0.841
EGJ27205.1
VRR-NUC domain protein; Identified by match to protein family HMM PF08774.
 
     0.806
EGJ26472.1
Hypothetical protein.
       0.778
EGJ27644.1
Hypothetical protein.
       0.773
EGJ27285.1
Hypothetical protein.
       0.773
EGJ26528.1
Hypothetical protein.
       0.773
EGJ27854.1
Identified by match to protein family HMM PF05037.
       0.612
EGJ26776.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
 
     0.599
EGJ26933.1
Hypothetical protein.
       0.562
EGJ27052.1
Hypothetical protein; Identified by glimmer; putative.
       0.553
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.