STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27656.1Identified by match to protein family HMM PF07360. (422 aa)    
Predicted Functional Partners:
EGJ26752.1
Putative phage terminase, large subunit; Identified by match to protein family HMM PF03354.
 
     0.906
EGJ28190.1
Hypothetical protein.
 
     0.868
EGJ26641.1
Hypothetical protein.
 
     0.837
EGJ27952.1
Prophage LambdaSa1, structural protein.
 
     0.831
EGJ26437.1
Hypothetical protein.
       0.796
EGJ28218.1
Hypothetical protein.
       0.794
EGJ27076.1
CHAP domain protein; Identified by match to protein family HMM PF05257; match to protein family HMM PF08460.
  
     0.619
EGJ27261.1
HNH endonuclease domain protein; Identified by match to protein family HMM PF01844.
       0.479
EGJ27620.1
Hypothetical protein.
       0.473
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (22%) [HD]