STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ28190.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
EGJ26752.1
Putative phage terminase, large subunit; Identified by match to protein family HMM PF03354.
 
     0.905
EGJ27656.1
Identified by match to protein family HMM PF07360.
 
     0.868
EGJ27952.1
Prophage LambdaSa1, structural protein.
 
     0.868
EGJ26641.1
Hypothetical protein.
 
     0.864
EGJ27620.1
Hypothetical protein.
       0.796
EGJ27076.1
CHAP domain protein; Identified by match to protein family HMM PF05257; match to protein family HMM PF08460.
  
     0.594
EGJ26572.1
Phage protein Gp19/Gp15/Gp42; Identified by match to protein family HMM PF09355.
       0.533
EGJ27639.1
Hypothetical protein.
       0.533
EGJ26767.1
Putative lipoprotein.
  
     0.460
EGJ26819.1
Hypothetical protein.
       0.450
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.