STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27620.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
EGJ28190.1
Hypothetical protein.
       0.796
EGJ26752.1
Putative phage terminase, large subunit; Identified by match to protein family HMM PF03354.
       0.600
EGJ26572.1
Phage protein Gp19/Gp15/Gp42; Identified by match to protein family HMM PF09355.
       0.533
EGJ27639.1
Hypothetical protein.
       0.533
EGJ27656.1
Identified by match to protein family HMM PF07360.
       0.473
EGJ26437.1
Hypothetical protein.
       0.467
EGJ26819.1
Hypothetical protein.
       0.450
EGJ27713.1
Hypothetical protein.
       0.450
EGJ27952.1
Prophage LambdaSa1, structural protein.
       0.441
pp150
Hypothetical protein.
       0.441
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.