STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27952.1Prophage LambdaSa1, structural protein. (185 aa)    
Predicted Functional Partners:
EGJ26641.1
Hypothetical protein.
 
     0.944
EGJ27544.1
Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF05709; match to protein family HMM TIGR01633.
   
   0.871
EGJ28190.1
Hypothetical protein.
 
     0.868
EGJ26752.1
Putative phage terminase, large subunit; Identified by match to protein family HMM PF03354.
 
     0.849
EGJ27656.1
Identified by match to protein family HMM PF07360.
 
     0.831
scpA_1
Putative c5a peptidase; Identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280.
  
 0.826
scpA_4
Putative c5a peptidase; Identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF04650; match to protein family HMM PF06280; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168.
  
 0.826
EGJ26949.1
LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM PF00746; match to protein family HMM PF01391; match to protein family HMM TIGR01167.
  
 0.814
spoIIIE
Stage III sporulation protein E; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.811
EGJ26629.1
Identified by match to protein family HMM PF01580.
   
 
 0.811
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.