STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ26730.1Transglycosylase associated protein; Identified by match to protein family HMM PF04226. (81 aa)    
Predicted Functional Partners:
EGJ27123.1
Hypothetical protein.
 
   
 0.595
EGJ27934.1
Hypothetical protein.
 
     0.569
ymgJ
Transglycosylase associated protein; Identified by match to protein family HMM PF04226.
 
    
0.555
EGJ27845.1
Transglycosylase associated protein; Identified by match to protein family HMM PF04226.
 
    
0.546
EGJ28258.1
Identified by match to protein family HMM PF03780.
 
    0.499
EGJ27141.1
Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
  
    0.478
EGJ28297.1
Putative alkaline shock protein 23; Identified by match to protein family HMM PF03780.
 
    0.461
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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