STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27934.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
EGJ27123.1
Hypothetical protein.
 
   
 0.971
EGJ28297.1
Putative alkaline shock protein 23; Identified by match to protein family HMM PF03780.
 
     0.910
EGJ28258.1
Identified by match to protein family HMM PF03780.
 
     0.902
EGJ27141.1
Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
     
 0.780
EGJ27845.1
Transglycosylase associated protein; Identified by match to protein family HMM PF04226.
 
     0.705
EGJ26730.1
Transglycosylase associated protein; Identified by match to protein family HMM PF04226.
 
     0.580
EGJ27978.1
Hypothetical protein.
  
     0.556
EGJ27200.1
Hypothetical protein.
  
     0.550
xerD
Site-specific tyrosine recombinase XerD-like protein; Putative tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site. Belongs to the 'phage' integrase family. XerD-like subfamily.
  
     0.528
ymgJ
Transglycosylase associated protein; Identified by match to protein family HMM PF04226.
 
     0.511
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.