STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27911.1TrkA C-terminal domain protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF02080. (214 aa)    
Predicted Functional Partners:
opuAC
ABC transporter, quaternary amine uptake transporter family, substrate-binding protein; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.
 
   
 0.788
EGJ27184.1
Hypothetical protein.
  
     0.600
tpx
Redoxin family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
       0.576
EGJ28297.1
Putative alkaline shock protein 23; Identified by match to protein family HMM PF03780.
       0.526
EGJ27141.1
Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
       0.518
proV
Glycine betaine/L-proline ABC transporter, ATP-binding protein ProV; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.
 
   
 0.478
EGJ28258.1
Identified by match to protein family HMM PF03780.
       0.451
EGJ27123.1
Hypothetical protein.
 
     0.447
EGJ27934.1
Hypothetical protein.
 
     0.438
napA
Na+/H+ antiporter; Identified by match to protein family HMM PF00999.
  
  
 0.425
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.