STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdS2Hypothetical protein. (200 aa)    
Predicted Functional Partners:
EGJ27258.1
Type III restriction enzyme, res subunit; Identified by match to protein family HMM PF00176; match to protein family HMM PF02384; match to protein family HMM PF04851.
  
 
 0.971
EGJ26815.1
Hypothetical protein.
  
 
 0.971
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.783
EGJ26533.1
Identified by match to protein family HMM PF06081.
       0.781
EGJ28166.1
YcaO-like family; Identified by match to protein family HMM PF02624; match to protein family HMM TIGR03604.
  
     0.736
EGJ26657.1
Hypothetical protein.
  
    0.726
polA_2
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.719
EGJ27502.1
Hypothetical protein.
 
     0.688
speB
Streptopain; Identified by match to protein family HMM PF01640.
 
     0.679
EGJ27986.1
Bifunctional DNA primase/polymerase, N-terminal domain protein; Identified by match to protein family HMM PF08708; match to protein family HMM PF09250.
  
     0.633
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (12%) [HD]