Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ27414.1 | dagK_2 | STRPO_0384 | STRPO_0382 | Identified by match to protein family HMM PF08876. | Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147. | 0.563 |
| EGJ27414.1 | maa | STRPO_0384 | STRPO_0387 | Identified by match to protein family HMM PF08876. | Maltose O-acetyltransferase; Identified by match to protein family HMM PF00132. | 0.422 |
| EGJ27414.1 | rnhB | STRPO_0384 | STRPO_0386 | Identified by match to protein family HMM PF08876. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.519 |
| EGJ27414.1 | ylqF | STRPO_0384 | STRPO_0385 | Identified by match to protein family HMM PF08876. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.519 |
| EGJ27414.1 | yqfA | STRPO_0384 | STRPO_0383 | Identified by match to protein family HMM PF08876. | Channel protein, hemolysin III family; Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | 0.859 |
| dagK_2 | EGJ27414.1 | STRPO_0382 | STRPO_0384 | Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147. | Identified by match to protein family HMM PF08876. | 0.563 |
| dagK_2 | yqfA | STRPO_0382 | STRPO_0383 | Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147. | Channel protein, hemolysin III family; Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | 0.581 |
| glpK | yqfA | STRPO_0997 | STRPO_0383 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Channel protein, hemolysin III family; Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | 0.450 |
| maa | EGJ27414.1 | STRPO_0387 | STRPO_0384 | Maltose O-acetyltransferase; Identified by match to protein family HMM PF00132. | Identified by match to protein family HMM PF08876. | 0.422 |
| maa | rnhB | STRPO_0387 | STRPO_0386 | Maltose O-acetyltransferase; Identified by match to protein family HMM PF00132. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.652 |
| maa | topA | STRPO_0387 | STRPO_0389 | Maltose O-acetyltransferase; Identified by match to protein family HMM PF00132. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.472 |
| maa | ylqF | STRPO_0387 | STRPO_0385 | Maltose O-acetyltransferase; Identified by match to protein family HMM PF00132. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.660 |
| maa | yqfA | STRPO_0387 | STRPO_0383 | Maltose O-acetyltransferase; Identified by match to protein family HMM PF00132. | Channel protein, hemolysin III family; Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | 0.420 |
| polA_2 | rnhB | STRPO_1262 | STRPO_0386 | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.699 |
| polA_2 | topA | STRPO_1262 | STRPO_0389 | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.928 |
| polA_2 | yqfA | STRPO_1262 | STRPO_0383 | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Channel protein, hemolysin III family; Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | 0.454 |
| rnhB | EGJ27414.1 | STRPO_0386 | STRPO_0384 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Identified by match to protein family HMM PF08876. | 0.519 |
| rnhB | maa | STRPO_0386 | STRPO_0387 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Maltose O-acetyltransferase; Identified by match to protein family HMM PF00132. | 0.652 |
| rnhB | polA_2 | STRPO_0386 | STRPO_1262 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.699 |
| rnhB | topA | STRPO_0386 | STRPO_0389 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.539 |
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