STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27079.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518. (319 aa)    
Predicted Functional Partners:
lpdA_1
Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350.
    
 0.999
graR
Putative response regulator protein GraR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 0.994
EGJ27605.1
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072.
 
 0.929
EGJ26634.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 
 
 
 0.925
hssR
Putative heme response regulator HssR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 0.919
rbsB
D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532.
    
 0.914
paaG
Identified by match to protein family HMM PF00378.
   
 0.903
lolD_2
Putative bacteriocin ABC transporter; Identified by match to protein family HMM PF00005.
 
  
 0.898
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 0.872
ciaR
Putative response regulator ArlR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 0.871
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.