Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ26957.1 | EGJ27623.1 | STRPO_0423 | STRPO_0422 | Identified by match to protein family HMM PF00903. | Identified by match to protein family HMM PF06207. | 0.495 |
| EGJ26957.1 | EGJ27907.1 | STRPO_0423 | STRPO_1845 | Identified by match to protein family HMM PF00903. | Identified by match to protein family HMM PF00724; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF04205; match to protein family HMM PF07992. | 0.450 |
| EGJ26957.1 | gyrA | STRPO_0423 | STRPO_0425 | Identified by match to protein family HMM PF00903. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.646 |
| EGJ26957.1 | ldh | STRPO_0423 | STRPO_0426 | Identified by match to protein family HMM PF00903. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.637 |
| EGJ26957.1 | srtA | STRPO_0423 | STRPO_0424 | Identified by match to protein family HMM PF00903. | Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076. | 0.641 |
| EGJ27623.1 | EGJ26957.1 | STRPO_0422 | STRPO_0423 | Identified by match to protein family HMM PF06207. | Identified by match to protein family HMM PF00903. | 0.495 |
| EGJ27623.1 | gyrA | STRPO_0422 | STRPO_0425 | Identified by match to protein family HMM PF06207. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.422 |
| EGJ27623.1 | srtA | STRPO_0422 | STRPO_0424 | Identified by match to protein family HMM PF06207. | Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076. | 0.422 |
| EGJ27907.1 | EGJ26957.1 | STRPO_1845 | STRPO_0423 | Identified by match to protein family HMM PF00724; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF04205; match to protein family HMM PF07992. | Identified by match to protein family HMM PF00903. | 0.450 |
| EGJ27907.1 | ldh | STRPO_1845 | STRPO_0426 | Identified by match to protein family HMM PF00724; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF04205; match to protein family HMM PF07992. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.931 |
| gyrA | EGJ26957.1 | STRPO_0425 | STRPO_0423 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Identified by match to protein family HMM PF00903. | 0.646 |
| gyrA | EGJ27623.1 | STRPO_0425 | STRPO_0422 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Identified by match to protein family HMM PF06207. | 0.422 |
| gyrA | ldh | STRPO_0425 | STRPO_0426 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.617 |
| gyrA | srtA | STRPO_0425 | STRPO_0424 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076. | 0.860 |
| ldh | EGJ26957.1 | STRPO_0426 | STRPO_0423 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | Identified by match to protein family HMM PF00903. | 0.637 |
| ldh | EGJ27907.1 | STRPO_0426 | STRPO_1845 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | Identified by match to protein family HMM PF00724; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF04205; match to protein family HMM PF07992. | 0.931 |
| ldh | gyrA | STRPO_0426 | STRPO_0425 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.617 |
| ldh | srtA | STRPO_0426 | STRPO_0424 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076. | 0.559 |
| srtA | EGJ26957.1 | STRPO_0424 | STRPO_0423 | Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076. | Identified by match to protein family HMM PF00903. | 0.641 |
| srtA | EGJ27623.1 | STRPO_0424 | STRPO_0422 | Identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076. | Identified by match to protein family HMM PF06207. | 0.422 |
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