STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ28064.1Transporter, auxin efflux carrier family protein; Identified by match to protein family HMM PF03547. (310 aa)    
Predicted Functional Partners:
EGJ26970.1
Identified by match to protein family HMM PF00300.
 
    0.823
maeB
NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949.
  
  
 0.785
EGJ27211.1
6-phospho-beta-glucosidase; Identified by match to protein family HMM PF00232.
       0.705
EGJ27525.1
Hypothetical protein.
 
     0.680
ugpQ_1
Identified by match to protein family HMM PF03009.
 
  
  0.532
EGJ26839.1
Identified by match to protein family HMM PF00657.
       0.437
EGJ27186.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895.
  
     0.436
EGJ27178.1
Putative membrane protein; Identified by match to protein family HMM PF01594.
       0.430
EGJ27704.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
  
     0.408
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.