STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msbAABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (579 aa)    
Predicted Functional Partners:
EGJ26925.1
Cobalt transport protein; Identified by match to protein family HMM PF02361.
 
  
  0.941
EGJ27392.1
Conserved hypothetical integral membrane protein TIGR02185; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
 
     0.915
ykoD_1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
0.862
EGJ28060.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
   
0.854
yfiR
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
 
     0.824
ybbL
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     
0.811
EGJ27103.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
0.770
artM_1
Arginine ABC transporter, ATP-binding protein ArtM; Identified by match to protein family HMM PF00005.
 
     
0.624
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.496
EGJ27775.1
AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550.
    
 0.469
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.