STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ28041.1Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. (406 aa)    
Predicted Functional Partners:
pabB
Aminodeoxychorismate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553.
   
 
 0.773
EGJ26928.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716.
 
     0.622
EGJ27775.1
AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550.
    
 0.581
EGJ27899.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.513
hasB
Nucleotide sugar dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026.
       0.490
EGJ27496.1
Identified by match to protein family HMM PF01261.
 
    0.451
EGJ26925.1
Cobalt transport protein; Identified by match to protein family HMM PF02361.
  
    0.442
EGJ26436.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
     0.434
msbA
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
     
 0.429
EGJ28060.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.428
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.