STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ26928.1DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716. (284 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA N-terminal domain protein; Identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; Belongs to the CinA family.
    
 0.801
EGJ28041.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
 
     0.622
EGJ27496.1
Identified by match to protein family HMM PF01261.
 
     0.601
EGJ27256.1
Isoprenylcysteine carboxyl methyltransferase family protein; Identified by match to protein family HMM PF04140.
  
     0.579
lacD_1
Tagatose-bisphosphate aldolase; Identified by match to protein family HMM PF01791; match to protein family HMM TIGR01232; Belongs to the aldolase LacD family.
  
 
  0.523
lacD
Tagatose-bisphosphate aldolase; Identified by match to protein family HMM PF01791; match to protein family HMM TIGR01232.
  
 
  0.521
lacD_2
Tagatose-bisphosphate aldolase; Identified by match to protein family HMM PF01791; match to protein family HMM TIGR01232; Belongs to the aldolase LacD family.
  
 
  0.521
EGJ26436.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
     0.505
EGJ26797.1
Methionine adenosyltransferase; Identified by match to protein family HMM PF01941.
 
     0.503
EGJ27502.1
Hypothetical protein.
  
    0.490
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.