STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ28121.1SNARE-like domain protein; Identified by match to protein family HMM PF09335. (202 aa)    
Predicted Functional Partners:
macB_2
Putative macrolide export ATP-binding/permease protein MacB; Identified by match to protein family HMM PF02687.
       0.796
macB_1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.786
EGJ26703.1
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.
       0.786
EGJ27566.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
  
 0.653
EGJ28217.1
Identified by match to protein family HMM PF06619.
 
     0.534
plsC
Acyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01553.
    
 0.534
EGJ26428.1
KH domain protein; Belongs to the UPF0109 family.
       0.512
rpsP
Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.
       0.512
yjbK
Adenylate cyclase; Identified by match to protein family HMM PF01928.
  
     0.497
EGJ27218.1
Identified by match to protein family HMM PF08860.
  
     0.495
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.