STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytCN-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520; match to protein family HMM PF07538. (625 aa)    
Predicted Functional Partners:
pulA
Pullulanase, type I; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.830
gluP
Peptidase, S54 family; Identified by match to protein family HMM PF01694.
  
   0.827
EGJ26389.1
Gram-positive signal peptide protein, YSIRK family; Identified by match to protein family HMM PF04650; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168.
  
 
 0.795
EGJ28286.1
Gram-positive signal peptide protein, YSIRK family; Identified by match to protein family HMM PF04650; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168.
  
 
 0.795
EGJ26780.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
    
  0.772
EGJ27225.1
CHAP domain protein; Identified by match to protein family HMM PF05257; match to protein family HMM PF08481.
    
  0.771
EGJ26921.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
       0.734
EGJ28106.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943; match to protein family HMM PF03023.
  
    0.730
EGJ27128.1
Putative membrane protein.
       0.726
EGJ27952.1
Prophage LambdaSa1, structural protein.
    
 0.704
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.