STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27128.1Putative membrane protein. (425 aa)    
Predicted Functional Partners:
EGJ28106.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943; match to protein family HMM PF03023.
       0.796
EGJ26921.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
       0.795
EGJ26780.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
       0.782
lytC
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520; match to protein family HMM PF07538.
       0.726
EGJ26633.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
       0.586
EGJ26997.1
Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Identified by match to protein family HMM PF01128.
       0.586
EGJ28082.1
Identified by match to protein family HMM PF04991.
       0.586
EGJ27352.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
       0.565
EGJ27237.1
Hypothetical protein.
       0.520
EGJ28298.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
       0.520
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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