STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiTPutative proton-coupled thiamine transporter YuaJ; Identified by match to protein family HMM PF09515; match to protein family HMM TIGR02357. (187 aa)    
Predicted Functional Partners:
ybaK
Putative YbaK/EbsC protein; Identified by match to protein family HMM PF04073; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
     
 0.596
EGJ27969.1
Identified by match to protein family HMM PF03733.
       0.596
cobC
Identified by match to protein family HMM PF00300.
       0.577
EGJ26804.1
Identified by match to protein family HMM PF02674.
  
     0.532
EGJ26559.1
Hypothetical protein.
  
     0.526
ribU
Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.
  
   
 0.511
ecfT_2
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
  
 0.468
EGJ26832.1
Putative lipoprotein.
 
     0.461
EGJ26400.1
Hypothetical protein.
 
   
 0.452
EGJ27740.1
Glycosyl hydrolase family 25; Identified by match to protein family HMM PF01183.
       0.452
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.