STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27970.1Tetratricopeptide repeat protein; Identified by match to protein family HMM PF03704. (1017 aa)    
Predicted Functional Partners:
yjbM
RelA/SpoT domain protein; Identified by match to protein family HMM PF04607.
  
  
  0.747
folE
GTP cyclohydrolase I; Identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063.
    
  0.717
EGJ27975.1
Identified by match to protein family HMM PF05962.
 
     0.690
lysS
lysine--tRNA ligase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.597
EGJ27972.1
LPXTG-motif cell wall anchor domain protein.
  
 
 0.580
dctB
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518.
  
 
 0.557
speB
Streptopain; Identified by match to protein family HMM PF01640.
  
 
 
 0.516
EGJ27502.1
Hypothetical protein.
  
  
  0.505
EGJ28194.1
Putative phosphoesterase; Identified by match to protein family HMM PF00149; match to protein family HMM TIGR03729.
   
 
 0.493
stk1
Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793.
   
 
 0.493
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.