Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amtAmmonium transporter; Identified by match to protein family HMM PF00909. (344 aa)    
Predicted Functional Partners:
glnA
Glutamine synthetase, type I; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; Belongs to the glutamine synthetase family.
  
  
 0.721
EGJ26879.1
Pyridine nucleotide-disulfide oxidoreductase.
 
     0.664
guaA
GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.614
gdhA
NAD(P)-specific glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.568
glnR
HTH-type transcriptional regulator GlnR; Identified by match to protein family HMM PF00376.
  
  
 0.502
EGJ27922.1
Hypothetical protein.
       0.441
pabB
Aminodeoxychorismate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553.
  
  
 0.416
pabA
Glutamine amidotransferase, class I; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566.
  
     0.406
EGJ27907.1
Identified by match to protein family HMM PF00724; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF04205; match to protein family HMM PF07992.
 
 
 0.403
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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