STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27811.1Metallopeptidase, SprT family; Identified by match to protein family HMM PF03926; Belongs to the SprT family. (150 aa)    
Predicted Functional Partners:
yhgF
Tex-like protein N-terminal domain protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371.
  
  
 0.821
EGJ26474.1
PspC domain protein; Identified by match to protein family HMM PF04024.
       0.637
ylbL
PDZ domain protein.
  
     0.609
ypsA_2
Identified by match to protein family HMM PF06908.
  
     0.561
yqeH
Ribosome biogenesis GTPase YqeH; Identified by match to protein family HMM PF01926; match to protein family HMM TIGR03597.
  
     0.528
EGJ27957.1
Bacterial ABC transporter protein EcsB; Identified by match to protein family HMM PF05975.
  
     0.522
yabA
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.521
yutD
Identified by match to protein family HMM PF06265.
  
     0.507
EGJ27442.1
Identified by match to protein family HMM PF06949; Belongs to the UPF0473 family.
  
     0.494
EGJ27988.1
Identified by match to protein family HMM PF06103.
 
     0.489
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.