STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27488.1Identified by match to protein family HMM PF00903. (127 aa)    
Predicted Functional Partners:
EGJ27127.1
Putative glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
  0.723
EGJ26729.1
Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
     
 0.712
sdaAB
L-serine dehydratase, iron-sulfur-dependent, beta subunit; Identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
  0.695
sdaAA
L-serine dehydratase, iron-sulfur-dependent, alpha subunit; Identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
  0.695
EGJ28333.1
Identified by match to protein family HMM PF06172.
       0.601
EGJ26594.1
Putative glyoxal reductase; Identified by match to protein family HMM PF00248.
   
 0.543
yvgN
Glyoxal reductase; Identified by match to protein family HMM PF00248.
   
 0.543
EGJ27769.1
ABC transporter, ATP-binding protein.
       0.497
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
       0.476
EGJ27907.1
Identified by match to protein family HMM PF00724; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF04205; match to protein family HMM PF07992.
  
 
 0.450
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.