STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycGPAS domain S-box protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229. (452 aa)    
Predicted Functional Partners:
walR
Transcriptional regulatory protein WalR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 0.989
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 0.913
saeR
Response regulator SaeR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 0.911
srrA
Putative transcriptional regulatory protein ResD; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 0.910
hssR
Putative heme response regulator HssR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 0.892
arlR
Response regulator ArlR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 0.884
EGJ27605.1
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072.
 
 0.856
vicX
Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
  
  
 0.832
ciaR
Putative response regulator ArlR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 0.829
graR
Putative response regulator protein GraR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 0.814
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.