STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pimBGlycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534. (444 aa)    
Predicted Functional Partners:
EGJ27566.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
  
0.962
gtfB
Accessory Sec system glycosyltransferase GtfB; Identified by match to protein family HMM TIGR02919.
   
 
 0.876
pulA
Pullulanase, type I; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; Belongs to the glycosyl hydrolase 13 family.
  
 0.823
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.797
asp3
Accessory Sec system protein Asp3; Identified by match to protein family HMM TIGR03711.
   
 
 0.787
asp2
Accessory Sec system protein Asp2; Identified by match to protein family HMM TIGR03712.
   
 
 0.777
dagK_2
Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147.
   
 
  0.698
dagK_1
Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147.
   
 
  0.698
EGJ28271.1
Cytoplasmic alpha-amylase; Identified by match to protein family HMM PF00128.
   
  0.662
EGJ27820.1
Hypothetical protein.
    
   0.641
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.