ybeZ protein (Streptococcus porcinus) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ybeZ

Identified by match to protein family HMM PF02562. (359 aa)

Predicted Functional Partners:

ybeY

0.904

recO

0.722

era

0.691

EGJ27779.1

0.639

EGJ28062.1

0.622

dgk

0.540

hflX

0.508

sun

0.465

sph

0.460

cmk

0.454

Your Current Organism:

Streptococcus porcinus

NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGJ27779.1	EGJ28062.1	STRPO_0798	STRPO_0797	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	Identified by match to protein family HMM PF03167.	0.697
EGJ27779.1	dgk	STRPO_0798	STRPO_0795	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	Putative undecaprenol kinase; Identified by match to protein family HMM PF01219.	0.517
EGJ27779.1	era	STRPO_0798	STRPO_0794	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.485
EGJ27779.1	ybeY	STRPO_0798	STRPO_0796	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.522
EGJ27779.1	ybeZ	STRPO_0798	STRPO_0799	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	Identified by match to protein family HMM PF02562.	0.639
EGJ28062.1	EGJ27779.1	STRPO_0797	STRPO_0798	Identified by match to protein family HMM PF03167.	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	0.697
EGJ28062.1	dgk	STRPO_0797	STRPO_0795	Identified by match to protein family HMM PF03167.	Putative undecaprenol kinase; Identified by match to protein family HMM PF01219.	0.584
EGJ28062.1	era	STRPO_0797	STRPO_0794	Identified by match to protein family HMM PF03167.	Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.550
EGJ28062.1	ybeY	STRPO_0797	STRPO_0796	Identified by match to protein family HMM PF03167.	Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.584
EGJ28062.1	ybeZ	STRPO_0797	STRPO_0799	Identified by match to protein family HMM PF03167.	Identified by match to protein family HMM PF02562.	0.622
cmk	hflX	STRPO_0567	STRPO_0123	Cytidylate kinase; Identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017.	GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	0.403
cmk	sun	STRPO_0567	STRPO_0958	Cytidylate kinase; Identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.455
cmk	ybeZ	STRPO_0567	STRPO_0799	Cytidylate kinase; Identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017.	Identified by match to protein family HMM PF02562.	0.454
dgk	EGJ27779.1	STRPO_0795	STRPO_0798	Putative undecaprenol kinase; Identified by match to protein family HMM PF01219.	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	0.517
dgk	EGJ28062.1	STRPO_0795	STRPO_0797	Putative undecaprenol kinase; Identified by match to protein family HMM PF01219.	Identified by match to protein family HMM PF03167.	0.584
dgk	era	STRPO_0795	STRPO_0794	Putative undecaprenol kinase; Identified by match to protein family HMM PF01219.	Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.818
dgk	recO	STRPO_0795	STRPO_1432	Putative undecaprenol kinase; Identified by match to protein family HMM PF01219.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.451
dgk	ybeY	STRPO_0795	STRPO_0796	Putative undecaprenol kinase; Identified by match to protein family HMM PF01219.	Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.936
dgk	ybeZ	STRPO_0795	STRPO_0799	Putative undecaprenol kinase; Identified by match to protein family HMM PF01219.	Identified by match to protein family HMM PF02562.	0.540
era	EGJ27779.1	STRPO_0794	STRPO_0798	Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	0.485