STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ideRIron dependent repressor, N-terminal DNA binding domain protein; Identified by match to protein family HMM PF01047; match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023. (215 aa)    
Predicted Functional Partners:
mtsC
Metal ion ABC transporter, permease protein; Identified by match to protein family HMM PF00950.
 
 
 0.873
atmD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
    
   0.825
mtsA
Metal ABC transporter substrate-binding lipoprotein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.801
mtsB
Putative manganese transport system ATP-binding protein MntA; Identified by match to protein family HMM PF00005.
  
 
 0.791
adcA_1
ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF01297; match to protein family HMM PF09223; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.656
adcB
ABC 3 transport family protein; Identified by match to protein family HMM PF00950.
  
 
 0.635
yusV
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.610
perR
Peroxide operon regulator; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
  
  
 0.562
adcA_2
Lysis protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.523
mntH
Manganese transport protein MntH; Identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197.
 
  
 0.514
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.