STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ28332.1Identified by match to protein family HMM PF07050; Belongs to the UPF0342 family. (158 aa)    
Predicted Functional Partners:
EGJ26589.1
Hypothetical protein.
  
    0.842
ymcA
Hypothetical protein; Belongs to the UPF0342 family.
    
 
 0.837
EGJ27342.1
Hypothetical protein.
  
     0.668
yjbK
Adenylate cyclase; Identified by match to protein family HMM PF01928.
  
     0.662
yaaT
PSP1 C-terminal domain protein; Identified by match to protein family HMM PF04468.
 
   
 0.660
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.630
EGJ28120.1
Identified by match to protein family HMM PF06279.
  
     0.567
EGJ26804.1
Identified by match to protein family HMM PF02674.
  
     0.554
braC
Identified by match to protein family HMM PF01094.
       0.523
penA
Penicillin-binding protein, transpeptidase domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717.
  
     0.504
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.