Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ27085.1 | EGJ27164.1 | STRPO_0873 | STRPO_0876 | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | 0.760 |
| EGJ27085.1 | EGJ27430.1 | STRPO_0873 | STRPO_0874 | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | Putative membrane protein. | 0.774 |
| EGJ27085.1 | EGJ27936.1 | STRPO_0873 | STRPO_0872 | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | 0.519 |
| EGJ27085.1 | bcrC | STRPO_0873 | STRPO_0877 | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | Identified by match to protein family HMM PF01569. | 0.595 |
| EGJ27085.1 | ribU | STRPO_0873 | STRPO_0878 | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.593 |
| EGJ27085.1 | ybhF | STRPO_0873 | STRPO_0875 | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | Putative bacitracin ABC transporter, ATP-binding protein BcrA; Identified by match to protein family HMM PF00005. | 0.757 |
| EGJ27164.1 | EGJ27085.1 | STRPO_0876 | STRPO_0873 | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | 0.760 |
| EGJ27164.1 | EGJ27430.1 | STRPO_0876 | STRPO_0874 | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | Putative membrane protein. | 0.778 |
| EGJ27164.1 | EGJ27936.1 | STRPO_0876 | STRPO_0872 | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | 0.494 |
| EGJ27164.1 | bcrC | STRPO_0876 | STRPO_0877 | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | Identified by match to protein family HMM PF01569. | 0.639 |
| EGJ27164.1 | ribU | STRPO_0876 | STRPO_0878 | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.639 |
| EGJ27164.1 | ybhF | STRPO_0876 | STRPO_0875 | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | Putative bacitracin ABC transporter, ATP-binding protein BcrA; Identified by match to protein family HMM PF00005. | 0.709 |
| EGJ27430.1 | EGJ27085.1 | STRPO_0874 | STRPO_0873 | Putative membrane protein. | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | 0.774 |
| EGJ27430.1 | EGJ27164.1 | STRPO_0874 | STRPO_0876 | Putative membrane protein. | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | 0.778 |
| EGJ27430.1 | EGJ27936.1 | STRPO_0874 | STRPO_0872 | Putative membrane protein. | Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | 0.496 |
| EGJ27430.1 | bcrC | STRPO_0874 | STRPO_0877 | Putative membrane protein. | Identified by match to protein family HMM PF01569. | 0.571 |
| EGJ27430.1 | ribU | STRPO_0874 | STRPO_0878 | Putative membrane protein. | Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.576 |
| EGJ27430.1 | ybhF | STRPO_0874 | STRPO_0875 | Putative membrane protein. | Putative bacitracin ABC transporter, ATP-binding protein BcrA; Identified by match to protein family HMM PF00005. | 0.930 |
| EGJ27936.1 | EGJ27085.1 | STRPO_0872 | STRPO_0873 | Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | Putative rRNA methylase; Identified by match to protein family HMM PF06962; match to protein family HMM PF08241. | 0.519 |
| EGJ27936.1 | EGJ27164.1 | STRPO_0872 | STRPO_0876 | Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | 0.494 |
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