Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ27640.1 | EGJ28172.1 | STRPO_0881 | STRPO_0884 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.780 |
| EGJ27640.1 | araC_2 | STRPO_0881 | STRPO_0886 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311. | 0.655 |
| EGJ27640.1 | galM | STRPO_0881 | STRPO_0880 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | 0.767 |
| EGJ27640.1 | galT | STRPO_0881 | STRPO_1692 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | UTP--hexose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF01087; match to protein family HMM PF02744; match to protein family HMM TIGR01239. | 0.552 |
| EGJ27640.1 | pulA | STRPO_0881 | STRPO_0616 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Pullulanase, type I; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; Belongs to the glycosyl hydrolase 13 family. | 0.800 |
| EGJ27640.1 | rafA | STRPO_0881 | STRPO_0882 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Alpha-galactosidase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF02065. | 0.946 |
| EGJ27640.1 | scrB | STRPO_0881 | STRPO_1097 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. | 0.633 |
| EGJ27640.1 | uidA_2 | STRPO_0881 | STRPO_2003 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Glycosyl hydrolase family 2, TIM barrel domain protein; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family. | 0.620 |
| EGJ27640.1 | ycjP_2 | STRPO_0881 | STRPO_0883 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.835 |
| EGJ27640.1 | yesO_2 | STRPO_0881 | STRPO_0885 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. | 0.747 |
| EGJ28172.1 | EGJ27640.1 | STRPO_0884 | STRPO_0881 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.780 |
| EGJ28172.1 | araC_2 | STRPO_0884 | STRPO_0886 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311. | 0.548 |
| EGJ28172.1 | galM | STRPO_0884 | STRPO_0880 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | 0.566 |
| EGJ28172.1 | rafA | STRPO_0884 | STRPO_0882 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Alpha-galactosidase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF02065. | 0.780 |
| EGJ28172.1 | ycjP_2 | STRPO_0884 | STRPO_0883 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.997 |
| EGJ28172.1 | yesO_2 | STRPO_0884 | STRPO_0885 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. | 0.998 |
| araC_2 | EGJ27640.1 | STRPO_0886 | STRPO_0881 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.655 |
| araC_2 | EGJ28172.1 | STRPO_0886 | STRPO_0884 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.548 |
| araC_2 | rafA | STRPO_0886 | STRPO_0882 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311. | Alpha-galactosidase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF02065. | 0.649 |
| araC_2 | ycjP_2 | STRPO_0886 | STRPO_0883 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.582 |
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