Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ27028.1 | murI | STRPO_0894 | STRPO_0896 | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.796 |
| EGJ27028.1 | rdgB | STRPO_0894 | STRPO_0895 | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | Non-canonical purine NTP pyrophosphatase RdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.940 |
| EGJ27028.1 | rluB | STRPO_0894 | STRPO_0889 | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | Pseudouridine synthase B, ribosomal large subunit; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family. | 0.687 |
| EGJ27028.1 | scpA_6 | STRPO_0894 | STRPO_0891 | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.796 |
| EGJ27028.1 | scpB | STRPO_0894 | STRPO_0890 | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.801 |
| EGJ27028.1 | xerD | STRPO_0894 | STRPO_0892 | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | Site-specific tyrosine recombinase XerD-like protein; Putative tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site. Belongs to the 'phage' integrase family. XerD-like subfamily. | 0.796 |
| EGJ27028.1 | ykuL | STRPO_0894 | STRPO_0893 | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | CBS domain protein; Identified by match to protein family HMM PF00571. | 0.849 |
| EGJ27502.1 | rdgB | STRPO_1196 | STRPO_0895 | Hypothetical protein. | Non-canonical purine NTP pyrophosphatase RdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.509 |
| EGJ27502.1 | scpA_6 | STRPO_1196 | STRPO_0891 | Hypothetical protein. | ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.880 |
| EGJ27689.1 | scpA_6 | STRPO_1870 | STRPO_0891 | Hypothetical protein. | ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.880 |
| murI | EGJ27028.1 | STRPO_0896 | STRPO_0894 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | 0.796 |
| murI | rdgB | STRPO_0896 | STRPO_0895 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Non-canonical purine NTP pyrophosphatase RdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.983 |
| murI | rluB | STRPO_0896 | STRPO_0889 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Pseudouridine synthase B, ribosomal large subunit; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family. | 0.695 |
| murI | scpA_6 | STRPO_0896 | STRPO_0891 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.805 |
| murI | scpB | STRPO_0896 | STRPO_0890 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.801 |
| murI | xerD | STRPO_0896 | STRPO_0892 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | Site-specific tyrosine recombinase XerD-like protein; Putative tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site. Belongs to the 'phage' integrase family. XerD-like subfamily. | 0.802 |
| murI | ykuL | STRPO_0896 | STRPO_0893 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | CBS domain protein; Identified by match to protein family HMM PF00571. | 0.796 |
| rdgB | EGJ27028.1 | STRPO_0895 | STRPO_0894 | Non-canonical purine NTP pyrophosphatase RdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | 0.940 |
| rdgB | EGJ27502.1 | STRPO_0895 | STRPO_1196 | Non-canonical purine NTP pyrophosphatase RdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Hypothetical protein. | 0.509 |
| rdgB | murI | STRPO_0895 | STRPO_0896 | Non-canonical purine NTP pyrophosphatase RdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.983 |
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