Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ26458.1 | EGJ27328.1 | STRPO_0934 | STRPO_0932 | Hydrolase, HD family; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00488. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.648 |
| EGJ26458.1 | polC | STRPO_0934 | STRPO_1704 | Hydrolase, HD family; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00488. | DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.694 |
| EGJ26458.1 | tmcAL | STRPO_0934 | STRPO_0930 | Hydrolase, HD family; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00488. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.698 |
| EGJ26458.1 | ybeB | STRPO_0934 | STRPO_0933 | Hydrolase, HD family; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00488. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.859 |
| EGJ27257.1 | EGJ27531.1 | STRPO_0928 | STRPO_0931 | Identified by match to protein family HMM PF08000. | Identified by match to protein family HMM PF01965. | 0.432 |
| EGJ27257.1 | EGJ28136.1 | STRPO_0928 | STRPO_0929 | Identified by match to protein family HMM PF08000. | TipAS antibiotic-recognition domain protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | 0.636 |
| EGJ27257.1 | tmcAL | STRPO_0928 | STRPO_0930 | Identified by match to protein family HMM PF08000. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.453 |
| EGJ27328.1 | EGJ26458.1 | STRPO_0932 | STRPO_0934 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Hydrolase, HD family; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00488. | 0.648 |
| EGJ27328.1 | EGJ27531.1 | STRPO_0932 | STRPO_0931 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Identified by match to protein family HMM PF01965. | 0.726 |
| EGJ27328.1 | EGJ28136.1 | STRPO_0932 | STRPO_0929 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | TipAS antibiotic-recognition domain protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | 0.580 |
| EGJ27328.1 | tmcAL | STRPO_0932 | STRPO_0930 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.695 |
| EGJ27328.1 | ybeB | STRPO_0932 | STRPO_0933 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.890 |
| EGJ27531.1 | EGJ27257.1 | STRPO_0931 | STRPO_0928 | Identified by match to protein family HMM PF01965. | Identified by match to protein family HMM PF08000. | 0.432 |
| EGJ27531.1 | EGJ27328.1 | STRPO_0931 | STRPO_0932 | Identified by match to protein family HMM PF01965. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.726 |
| EGJ27531.1 | EGJ28136.1 | STRPO_0931 | STRPO_0929 | Identified by match to protein family HMM PF01965. | TipAS antibiotic-recognition domain protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | 0.513 |
| EGJ27531.1 | tmcAL | STRPO_0931 | STRPO_0930 | Identified by match to protein family HMM PF01965. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.759 |
| EGJ27531.1 | ybeB | STRPO_0931 | STRPO_0933 | Identified by match to protein family HMM PF01965. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.577 |
| EGJ28136.1 | EGJ27257.1 | STRPO_0929 | STRPO_0928 | TipAS antibiotic-recognition domain protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Identified by match to protein family HMM PF08000. | 0.636 |
| EGJ28136.1 | EGJ27328.1 | STRPO_0929 | STRPO_0932 | TipAS antibiotic-recognition domain protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.580 |
| EGJ28136.1 | EGJ27531.1 | STRPO_0929 | STRPO_0931 | TipAS antibiotic-recognition domain protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Identified by match to protein family HMM PF01965. | 0.513 |
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