Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ27026.1 | rsgA | STRPO_0957 | STRPO_1202 | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.591 |
| EGJ27026.1 | stk1 | STRPO_0957 | STRPO_0956 | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481. | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.999 |
| EGJ27026.1 | sun | STRPO_0957 | STRPO_0958 | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.984 |
| EGJ27693.1 | stk1 | STRPO_2041 | STRPO_0956 | Sigma-70, region 4; Identified by match to protein family HMM PF08281. | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.780 |
| EGJ28072.1 | stk1 | STRPO_1066 | STRPO_0956 | Serine-type D-Ala-D-Ala carboxypeptidase; Identified by match to protein family HMM PF02557. | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.732 |
| cpsD | stk1 | STRPO_0210 | STRPO_0956 | Tyrosine-protein kinase CpsD; Identified by match to protein family HMM TIGR01007. | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.769 |
| gpsB | stk1 | STRPO_0968 | STRPO_0956 | DivIVA domain protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.797 |
| hprK | stk1 | STRPO_0720 | STRPO_0956 | HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...] | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.771 |
| mapZ | stk1 | STRPO_0965 | STRPO_0956 | Hypothetical protein; Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning. | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.809 |
| rsgA | EGJ27026.1 | STRPO_1202 | STRPO_0957 | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481. | 0.591 |
| rsgA | stk1 | STRPO_1202 | STRPO_0956 | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.723 |
| rsgA | sun | STRPO_1202 | STRPO_0958 | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.471 |
| sigV | stk1 | STRPO_1591 | STRPO_0956 | Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | 0.780 |
| stk1 | EGJ27026.1 | STRPO_0956 | STRPO_0957 | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481. | 0.999 |
| stk1 | EGJ27693.1 | STRPO_0956 | STRPO_2041 | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | Sigma-70, region 4; Identified by match to protein family HMM PF08281. | 0.780 |
| stk1 | EGJ28072.1 | STRPO_0956 | STRPO_1066 | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | Serine-type D-Ala-D-Ala carboxypeptidase; Identified by match to protein family HMM PF02557. | 0.732 |
| stk1 | cpsD | STRPO_0956 | STRPO_0210 | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | Tyrosine-protein kinase CpsD; Identified by match to protein family HMM TIGR01007. | 0.769 |
| stk1 | gpsB | STRPO_0956 | STRPO_0968 | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | DivIVA domain protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.797 |
| stk1 | hprK | STRPO_0956 | STRPO_0720 | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...] | 0.771 |
| stk1 | mapZ | STRPO_0956 | STRPO_0965 | Putative serine/threonine-protein kinase PrkC; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163; match to protein family HMM PF03793. | Hypothetical protein; Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning. | 0.809 |
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