Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ26602.1 | EGJ28334.1 | STRPO_0988 | STRPO_0990 | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.730 |
| EGJ26602.1 | ecsA_2 | STRPO_0988 | STRPO_0989 | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.929 |
| EGJ26602.1 | proB | STRPO_0988 | STRPO_0987 | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.637 |
| EGJ26664.1 | EGJ27405.1 | STRPO_1593 | STRPO_1604 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Putative membrane protein. | 0.883 |
| EGJ26664.1 | atpA | STRPO_1593 | STRPO_0607 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.673 |
| EGJ26664.1 | atpD | STRPO_1593 | STRPO_0605 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.679 |
| EGJ26664.1 | atpG | STRPO_1593 | STRPO_0606 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.640 |
| EGJ26664.1 | ecsA_2 | STRPO_1593 | STRPO_0989 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.934 |
| EGJ26664.1 | glnP_1 | STRPO_1593 | STRPO_0106 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Lysine-arginine-ornithine-binding periplasmic protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.688 |
| EGJ26664.1 | glnP_2 | STRPO_1593 | STRPO_1791 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter, permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.688 |
| EGJ27405.1 | EGJ26664.1 | STRPO_1604 | STRPO_1593 | Putative membrane protein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.883 |
| EGJ27405.1 | ecsA_2 | STRPO_1604 | STRPO_0989 | Putative membrane protein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.882 |
| EGJ28334.1 | EGJ26602.1 | STRPO_0990 | STRPO_0988 | Hypothetical protein. | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.730 |
| EGJ28334.1 | ecsA_2 | STRPO_0990 | STRPO_0989 | Hypothetical protein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.701 |
| EGJ28334.1 | proB | STRPO_0990 | STRPO_0987 | Hypothetical protein. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.584 |
| atpA | EGJ26664.1 | STRPO_0607 | STRPO_1593 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.673 |
| atpA | atpD | STRPO_0607 | STRPO_0605 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpG | STRPO_0607 | STRPO_0606 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | ecsA_2 | STRPO_0607 | STRPO_0989 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.673 |
| atpD | EGJ26664.1 | STRPO_0605 | STRPO_1593 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.679 |
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